丹参LBD26基因的克隆和表达分析

Cloning and expression analysis of LBD26 gene in Salvia miltiorrhiza

  • 摘要: 为了解丹参LBD26转录因子在药效成分积累中的生物学作用,克隆了SmLBD26基因的编码序列,利用生物信息学方法进行序列特征、同源进化及启动子元件分析,通过荧光定量PCR技术检测其组织表达特性及激素和胁迫处理下的表达量。序列特征结果表明,SmLBD26的CDS序列全长为702 bp,编码233个氨基酸。SmLBD26蛋白为不稳定、亲水的核蛋白;其二级结构以无规则卷曲为主,其次是α螺旋、延伸链和β转角。同源与进化分析发现,与LBD蛋白同源性较高,具有LOB结构域,是Ⅱ类LBD转录因子。启动子元件分析结果表明,SmLBD26启动子中含有激素及非生物胁迫应答相关的元件。表达量分析结果显示,SmLBD26基因在根、茎、叶和花中均有表达,且在根中表达量高;经脱落酸、生长素、茉莉酸、4℃和镉处理丹参小苗后SmLBD26的表达均下调,表明SmLBD26基因参与了丹参对激素及不同胁迫的应答。

     

    Abstract: To understand the biological role of Salvia miltiorrhiza LBD26 transcription factor in the accumulation of medicinal ingredients, the SmLBD26 gene was cloned; the sequence characteristics, homologous evolution and promoter element analysis were investigated using bioinformatic methods; The expression specificity of the tissues and the expression level under hormonal and stress treatments were tested by quantitative real time polymerase chain reaction(qRT-PCR). Sequence characterization results showed that the total length of SmLBD26 CDS was 702 bp, encoding 233 amino acids and the SmLBD26 protein was an unstable, hydrophilic nucleoprotein. The secondary structure of the SmLBD26 protein was dominated by random coil, followed by α-helix, extended strand and β-turn. The Blastp and phylogenetic analysis found that it contained a LOB domain, belonged to the Class Ⅱ LBD subfamily and it had high homology and a close evolutionary relationship with LBD proteins from other species. Expression analysis results showed that the SmLBD26 gene was expressed in roots, stems, leaves and flowers, and the expression level was high in roots. The expression of SmLBD26 was down regulated after treatment with abscisic acid, auxin, MeJA, 4 ℃ and cadmium, indicating that the SmLBD26 gene was involved in the response of Salvia miltiorrhiza to hormones and different stresses.

     

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